PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019156206.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 585aa MW: 64753.9 Da PI: 6.5197

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019156206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.7	1.1e-09	399	436	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yps++++ L++++gL+++qV++WF N R + XP_019156206.1 399 FEHflNPYPSEADKVLLSRQTGLSKNQVSNWFINARVR 436 664459******************************88 PP
2	BELL	102.1	4.2e-33	254	325	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er e+q+kk kLl +leeV++rY +y+eq+ +++ssF+ v+g+g+a+pY +A+ a+SrhFrcLkd i++q+ XP_019156206.1 254 ERSEIQRKKIKLLAMLEEVEDRYVRYREQMGVMVSSFDSVMGCGAAAPYMGFAQTAMSRHFRCLKDGIVSQL 325 789******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MSESYSQQEF YNNPCREMMM RIHGGFEGDA PPGCDDSNGG MLAEMVDNYR SAWRKSAAQV 60 LEEQIQASSY GGRSWPQKDN PLSLNQALPL MNLIHVKPSS SPPPRTAPFT LAGTDLSPES 120 NLIHQGFQVV SPLITMEEAH QGLSLSLKME EFQTRNGGIN NNYYTNQELL PLGTHFLEEP 180 RREIEVMNVM QVRHPRYLKA AQELLQEFCC LGRELHFKNG GRVKKRSGSG NPSCGDTETG 240 NSPAAERPPL SAAERSEIQR KKIKLLAMLE EVEDRYVRYR EQMGVMVSSF DSVMGCGAAA 300 PYMGFAQTAM SRHFRCLKDG IVSQLRETYR ALGEKKQGGV AGSYGLTKGE TPRLKLLDQK 360 LRQQKGALNQ MGMLLDSEPW RPQRGLPDRS VNVLRSWLFE HFLNPYPSEA DKVLLSRQTG 420 LSKNQVSNWF INARVRLWKP MVEEMYEQET KEEENAQTPM PRDDDDDNSK EITATTSTTP 480 TTTTTLPSAA ATKRCQFNAT ENDSSRTNII NNYAAQYAAS GNQVTMINGN TAAVPPPVSL 540 SFAAAAAPVV DCGGGFGTPA TGDVSLTLGL RHPENSVTIT NFGAY

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MSESYSQQEF YNNPCREMMM RIHGGFEGDA PPGCDDSNGG MLAEMVDNYR SAWRKSAAQV  60
LEEQIQASSY GGRSWPQKDN PLSLNQALPL MNLIHVKPSS SPPPRTAPFT LAGTDLSPES  120
NLIHQGFQVV SPLITMEEAH QGLSLSLKME EFQTRNGGIN NNYYTNQELL PLGTHFLEEP  180
RREIEVMNVM QVRHPRYLKA AQELLQEFCC LGRELHFKNG GRVKKRSGSG NPSCGDTETG  240
NSPAAERPPL SAAERSEIQR KKIKLLAMLE EVEDRYVRYR EQMGVMVSSF DSVMGCGAAA  300
PYMGFAQTAM SRHFRCLKDG IVSQLRETYR ALGEKKQGGV AGSYGLTKGE TPRLKLLDQK  360
LRQQKGALNQ MGMLLDSEPW RPQRGLPDRS VNVLRSWLFE HFLNPYPSEA DKVLLSRQTG  420
LSKNQVSNWF INARVRLWKP MVEEMYEQET KEEENAQTPM PRDDDDDNSK EITATTSTTP  480
TTTTTLPSAA ATKRCQFNAT ENDSSRTNII NNYAAQYAAS GNQVTMINGN TAAVPPPVSL  540
SFAAAAAPVV DCGGGFGTPA TGDVSLTLGL RHPENSVTIT NFGAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-81	TALE family protein