PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019156606.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

BES1

Protein Properties

Length: 641aa MW: 72617.6 Da PI: 7.0078

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019156606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	111.6	1.3e-34	47	181	3	136
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.s 96 + rk+++k +E++k RER RRa ++++ aGLR++Gn+ lp r+D+n+Vl AL+r+AG++ve+DG+tyr + ++ + + ++l XP_019156606.1 47 KSRKEREKQKERTKFRERDRRAFTSRMMAGLRQYGNFDLPPRSDMNDVLSALARQAGFTVEPDGNTYRPAAPSN-----VVPYPARVVGNPLPaD 136 689*****************************************************************433333.....3333333333443334 PP DUF822 97 slkssalaspvesysaspksssfpspssldsislasa.......asl 136 slk++++++ +e +++++ ++++sp+s+ds+ + ++ +s+ XP_019156606.1 137 SLKNCSTSASIE--ASVLRIDESLSPASFDSVVVPDTgakadkyTSS 181 455555544443..456667777777777777776655443333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MDSQNPNPNP NYDRNSNPNP RPQPASRRPR GFAARMAGNA ASATANKSRK EREKQKERTK 60 FRERDRRAFT SRMMAGLRQY GNFDLPPRSD MNDVLSALAR QAGFTVEPDG NTYRPAAPSN 120 VVPYPARVVG NPLPADSLKN CSTSASIEAS VLRIDESLSP ASFDSVVVPD TGAKADKYTS 180 SSPMNSSGCL EADQLMQEVH TGEHGHDFLG TPYVPVYVML SSGIINNLCQ LVDPSGVQHE 240 LQLLKSLNID GVVINCWWGI VERRNQEYKW LGYKELFNII RDMGLKLQVV MAFNAYGGND 300 FNVDISLPEW VLKIGKDCPE IFFADRVGRW NTECLSWGID NERILDRRTG REVYYEFMRS 360 FRAEFNDLFT EGLISAVEIG LGASGELKYP SFSERNGWRF PGIGEFQCYD KFLLQSLKYA 420 AEKRGQPSWA MGPNYVGCYN SRPHETRFFR EKGDYNSCYG RFFLQWYTQA LIDHADTILS 480 AATEAFDETP LVVKIPGIHW WYKASSHAAE LTAGYYNTSN RDGYSPLFEV LKKHNATVKL 540 VSKETQISPH DLVQAYADPN GLCWQVLNGA WEKGVAIAGH NAPGDYDRET FMRLVETSKP 600 RNDPYRHHST FFVLERPWQR IQTAENISEL EYFVKCMHGY A

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MDSQNPNPNP NYDRNSNPNP RPQPASRRPR GFAARMAGNA ASATANKSRK EREKQKERTK  60
FRERDRRAFT SRMMAGLRQY GNFDLPPRSD MNDVLSALAR QAGFTVEPDG NTYRPAAPSN  120
VVPYPARVVG NPLPADSLKN CSTSASIEAS VLRIDESLSP ASFDSVVVPD TGAKADKYTS  180
SSPMNSSGCL EADQLMQEVH TGEHGHDFLG TPYVPVYVML SSGIINNLCQ LVDPSGVQHE  240
LQLLKSLNID GVVINCWWGI VERRNQEYKW LGYKELFNII RDMGLKLQVV MAFNAYGGND  300
FNVDISLPEW VLKIGKDCPE IFFADRVGRW NTECLSWGID NERILDRRTG REVYYEFMRS  360
FRAEFNDLFT EGLISAVEIG LGASGELKYP SFSERNGWRF PGIGEFQCYD KFLLQSLKYA  420
AEKRGQPSWA MGPNYVGCYN SRPHETRFFR EKGDYNSCYG RFFLQWYTQA LIDHADTILS  480
AATEAFDETP LVVKIPGIHW WYKASSHAAE LTAGYYNTSN RDGYSPLFEV LKKHNATVKL  540
VSKETQISPH DLVQAYADPN GLCWQVLNGA WEKGVAIAGH NAPGDYDRET FMRLVETSKP  600
RNDPYRHHST FFVLERPWQR IQTAENISEL EYFVKCMHGY A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	BES1 family protein