PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156749.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 252aa    MW: 28611.8 Da    PI: 6.2554
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-172980155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++ GVr++  +grWvAeI+d ++   + r +lg++ taeeAa+a+++a+  l+g
  XP_019156749.1 29 KKFVGVRQRG-SGRWVAEIKDTTTH--KIRMWLGTYATAEEAARAYDQAACLLRG 80
                    589******9.7*********5444..4**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEIHGQQHDK EVMKSQEQER RQSDNKLKKK FVGVRQRGSG RWVAEIKDTT THKIRMWLGT  60
YATAEEAARA YDQAACLLRG SNARTNFVTH HRLPADSPLA ARITNLLNTK NCSKPQPKSS  120
SSNTILTCRR NNNNNNNLDD NDSVSSNGKM NIPDTEDSLF SYYDIQKTQF DADLHSCSYE  180
LQKGSSSWSL EKSIDEFGEE LIEFPKTTTV AEMGISEFER MRVEEYMQAI IKDGAGESLW  240
DLPPLCSLSN TY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-22ERF family protein