PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157007.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 260aa MW: 29576.9 Da PI: 8.5713

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.7e-55	3	128	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++kv +++++++ +i+evd ++vePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat +gyWkatgkdke+++ XP_019157007.1 3 LPPGFRFHPTDEELITYYLTPKVLDTRFSAAPAIAEVDFNSVEPWDLPWKAKMGEKEWYFFCVRDRKYPTGMRTNRATGAGYWKATGKDKEIFK- 96 79**************************999***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++lvg+kktLvfykgrap+gekt Wvmhey XP_019157007.1 97 AKTLVGMKKTLVFYKGRAPRGEKTGWVMHEYY 128 999*************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MDLPPGFRFH PTDEELITYY LTPKVLDTRF SAAPAIAEVD FNSVEPWDLP WKAKMGEKEW 60 YFFCVRDRKY PTGMRTNRAT GAGYWKATGK DKEIFKAKTL VGMKKTLVFY KGRAPRGEKT 120 GWVMHEYYRL EAMHNLPKSA KNEWVICRVF KKSSGGNRIP ISGLIRGENG GKMPPLMEIS 180 ESSSHVPCFS NSVEDQKPRN SESSGTLSNH RPLIMPAELD VDSGMMMMQD HSILKLLLGN 240 NQDSEAPGAV DLDCLWNYHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39610.1	1e-104	NAC family protein