PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157111.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 92aa    MW: 10307.7 Da    PI: 10.0252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.11.3e-0723591854
                    HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  ++L++llP++ + +s K s   +L+++++YI++L
  XP_019157111.1 23 QLVSKLQQLLPELRSRRSAKASAGKVLQETCNYIRNL 59
                    56689*******779********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRQSS SASSRISDDQ IIQLVSKLQQ LLPELRSRRS AKASAGKVLQ ETCNYIRNLH  60
KEVDDLSDRL SHLLSTIDAD TPEAAIIRSL IM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.16e-24bHLH family protein