PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157167.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 195aa    MW: 21533.6 Da    PI: 5.4917
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.38.9e-192170355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ykGVr++k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  XP_019157167.1 21 YKGVRRRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 70
                    9******************9.....4489***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSTRGWRSNN ETRDSSEAAA YKGVRRRKSS GKWVSEIREP RSPNRIWLGT FPTPEMAAVA  60
YDVAALALKG PHAELNFPNS AASLPIPASN SSRDIQEAAA LAAAAAGAAA DALRPAQVDN  120
YSGGIAADET YEHHHHHQTH NEFVDEDLIF DMPNVIANMA EGMLLSPPRF QQYSYDHYDY  180
DYASTATDHN LWNYP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12228KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.19e-42ERF family protein