PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157195.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 435aa MW: 46812 Da PI: 6.0744

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.7	6.7e-15	236	288	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR+RK+ + Le+ v +L+ eN++L +++++ ++k XP_019157195.1 236 DAKRVRRMLSNRESARRSRRRKQVHLTDLETQVSQLKVENSSLL---KRWTEVSQK 288 689*************************************9998...555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MDKVLTVGEN VDKFMPPPLP LPPDKMMMSR SPSEYAFQRF LQEATASVDH TLSSSPPASC 60 SSTSAPAASG RQRLPQNDVV EISDRNLGAD RDVNFGHESS GAESATETAK TTSLGAGPAA 120 NVPIGSEDYQ TFLKSRLYLA CAAVAFSRGN CMDPQDSATM LPDKGLEASI SNPGSVVPPK 180 GSGNDFPKGD AEGPAGTSTL PAVQKKSSAR AQSASGSEPS DDDEAEGEAE TTHRTDAKRV 240 RRMLSNRESA RRSRRRKQVH LTDLETQVSQ LKVENSSLLK RWTEVSQKHN DAAVDNRILK 300 ADVETLRAKV KMAEETVKRI TGMHSLFQTM PEIPTLSIPS FVDSHSDTSA DATVPLQEDA 360 DNHYYQSLCH DSSIQNGLLD IPPVDNARQD SAATAGVNNI GGMASMLRVA SLENLQNRIR 420 REAGGSCRTQ CRISK

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MDKVLTVGEN VDKFMPPPLP LPPDKMMMSR SPSEYAFQRF LQEATASVDH TLSSSPPASC  60
SSTSAPAASG RQRLPQNDVV EISDRNLGAD RDVNFGHESS GAESATETAK TTSLGAGPAA  120
NVPIGSEDYQ TFLKSRLYLA CAAVAFSRGN CMDPQDSATM LPDKGLEASI SNPGSVVPPK  180
GSGNDFPKGD AEGPAGTSTL PAVQKKSSAR AQSASGSEPS DDDEAEGEAE TTHRTDAKRV  240
RRMLSNRESA RRSRRRKQVH LTDLETQVSQ LKVENSSLLK RWTEVSQKHN DAAVDNRILK  300
ADVETLRAKV KMAEETVKRI TGMHSLFQTM PEIPTLSIPS FVDSHSDTSA DATVPLQEDA  360
DNHYYQSLCH DSSIQNGLLD IPPVDNARQD SAATAGVNNI GGMASMLRVA SLENLQNRIR  420
REAGGSCRTQ CRISK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	258	RRSRRRKQ
2	253	258	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-49	bZIP family protein