PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157379.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 171aa    MW: 18835.1 Da    PI: 8.9536
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.51.5e-3854112260
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                     +ek+++cprC+st+tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrknk 
  XP_019157379.1  54 PEKIIPCPRCKSTETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKNKP 112
                     68999****************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MAEVEESHNT QGIKLFGATI PVQTKQPKED IKSKSKAAVA DGGDQTAGED QKRPEKIIPC  60
PRCKSTETKF CYFNNYNVNQ PRHFCKGCQR YWTAGGALRN VPVGAGRRKN KPPCRGLNGG  120
LSEGCLFDAS GVNQLEFDGE VVEGWQVAEN GDFRHLFPAK RRRNTSGSQS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34140.17e-60Dof family protein