PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157431.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

DBB

Protein Properties

Length: 212aa MW: 23467.8 Da PI: 6.9004

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.6	1e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H XP_019157431.1 4 LCDACESAAAILFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	26.2	1.6e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H XP_019157431.1 52 KVQRCDICENAPAFFYCEIDGSSLCLQCDMMVHVGgkrtH 91 6799**************************9996544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRTLCDACES AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SKVQRCDICE 60 NAPAFFYCEI DGSSLCLQCD MMVHVGGKRT HGRYLLIRQR IEFPGDKSGQ LDEPGLQPTE 120 KAEPRREPNH PFKLMMKENK PTNRDGAVAM LDKNADVGSK MENKLIDLNT RPHRMHGQAS 180 ANQEPGIDGL SDNNHEPGCV IPIGPLKRET EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	5e-84	DBB family protein