PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157783.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

FAR1

Protein Properties

Length: 752aa MW: 86334.5 Da PI: 7.869

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.8e-20	48	134	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA +vGFsvr+ k+++++ +++i+++ + Csk g+++++ k ++ rtgC a ++ ++++g w v+k e+ HnHel+p XP_019157783.1 48 DMYNDYAFRVGFSVRRGKQRYTSATKTIKTKMLHCSKDGFKRSTGKG----CYSKIDGRTGCGAYVQFDLHENGMWIVSKHEKLHNHELVP 134 58**************************************99887....88999*******************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MYDSIAQQHV AETEHITDPV GVVDTEDANP ANQDLVGMLV CSVDEAYDMY NDYAFRVGFS 60 VRRGKQRYTS ATKTIKTKML HCSKDGFKRS TGKGCYSKID GRTGCGAYVQ FDLHENGMWI 120 VSKHEKLHNH ELVPPSKSCL LRSHRMVSRN HISYLTDLKS SGVSVADGVR FLKTQSGGSP 180 LVGFISTDAY NSLCTDALNR LDGTDSNTLI EIFKRRQSSE RDFYFDFEVD LESRLCSFFW 240 RDGRMRRDYD LFGDLLVHDT TYRTNKYDMI CGPFVGMNHH CMNVMFGCGF LMNEKTESFV 300 WLFKTFLRSM DYKSPQSIMT DQCAVMAAAI VQVFPSSRHR LCIWHIGENS KKHIKGLRNQ 360 KYFLDIFNCL LKYTDTEAEF EFYWTRMVTT YKCHNNHWIE KLYGCREKWC PAFNKDYFSG 420 GILSSQRSET TNHSISRRLS KTSGLCDFYN SFVGVISEWR SRDNGEDVLC SQGVPTMVMD 480 NVKILLHARE IYTIEIYYLF EEQFLNGGSC YQECVMLEDG VYKYHVWRPD VDIIRHEVIF 540 NSRQMDIGCS CKLFTELRIL CCHCLRILNV HCVSEVPEKY ILKRWTKKVV EVDNFDIMSR 600 VDSGNGASSI WLLEIIRKFQ RLAVYSQENI EGRKICEEAI ADAKRRLEAE CGGSLFEECD 660 IGSLSGVIKD PSTRRTKGLR NRRVSSVISK KYNKARGRKH LANMVASKIK SAVQSQVEDV 720 ILNIAGDGYL VHPSFGGSIF CHVSTMSSME DN

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MYDSIAQQHV AETEHITDPV GVVDTEDANP ANQDLVGMLV CSVDEAYDMY NDYAFRVGFS  60
VRRGKQRYTS ATKTIKTKML HCSKDGFKRS TGKGCYSKID GRTGCGAYVQ FDLHENGMWI  120
VSKHEKLHNH ELVPPSKSCL LRSHRMVSRN HISYLTDLKS SGVSVADGVR FLKTQSGGSP  180
LVGFISTDAY NSLCTDALNR LDGTDSNTLI EIFKRRQSSE RDFYFDFEVD LESRLCSFFW  240
RDGRMRRDYD LFGDLLVHDT TYRTNKYDMI CGPFVGMNHH CMNVMFGCGF LMNEKTESFV  300
WLFKTFLRSM DYKSPQSIMT DQCAVMAAAI VQVFPSSRHR LCIWHIGENS KKHIKGLRNQ  360
KYFLDIFNCL LKYTDTEAEF EFYWTRMVTT YKCHNNHWIE KLYGCREKWC PAFNKDYFSG  420
GILSSQRSET TNHSISRRLS KTSGLCDFYN SFVGVISEWR SRDNGEDVLC SQGVPTMVMD  480
NVKILLHARE IYTIEIYYLF EEQFLNGGSC YQECVMLEDG VYKYHVWRPD VDIIRHEVIF  540
NSRQMDIGCS CKLFTELRIL CCHCLRILNV HCVSEVPEKY ILKRWTKKVV EVDNFDIMSR  600
VDSGNGASSI WLLEIIRKFQ RLAVYSQENI EGRKICEEAI ADAKRRLEAE CGGSLFEECD  660
IGSLSGVIKD PSTRRTKGLR NRRVSSVISK KYNKARGRKH LANMVASKIK SAVQSQVEDV  720
ILNIAGDGYL VHPSFGGSIF CHVSTMSSME DN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-79	FAR1 family protein