PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157800.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Nin-like
Protein Properties Length: 329aa    MW: 37572.3 Da    PI: 8.418
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK543.2e-17161202546
          RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                     i+ + l++ F ++  dAAk+L+v++++LKr+CR +GI+RWP 
  XP_019157800.1 161 ITRQLLQQRFGMSRDDAAKTLKVSTSTLKRACRDFGINRWPN 202
                     89999************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MENRLPHSDV NLFWKCKHST LSLIEVEVGI KRAWIEEKSV THPPRNGQCG FQGGAVVEFL  60
EKEFGDTSNS LQPIIKCLEM VSLQQHGNNL ERQLLDNIEW LGAELKKIVK LQRLAADSKK  120
VRILPPLLEE AECGVMQLDS PCEPHIPKTH TISRWEKDYG ITRQLLQQRF GMSRDDAAKT  180
LKVSTSTLKR ACRDFGINRW PNHRGKMPNC SLNQKQHVQA LKKHKGIQSS PPPLQATNTS  240
QCNSSMSVKV TYQNDTIRFP LSSSSTIIYL EEQLETKLKI SLENMSIKYQ DEEDEWITLT  300
CDSELMHGME VLRSCGKTVI RMMVTPKFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.17e-15Nin-like family protein