PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157841.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 227aa    MW: 25758.5 Da    PI: 9.2777
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.49.8e-17128217198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v+   +l lp +f++++  +k  + ++tl de+g + + k+   k++    l++GW++F+ +++L +gD +vF+l++ ++f  +v 
  XP_019157841.1 128 FIKPMLQSHVTGGFWLGLPVQFCKANL-PK-HDEMITLVDENGDESDTKYLAMKTG----LSGGWRGFALDHELVDGDALVFQLIEPTRF--KVY 214
                     89*********************9994.33.3459***************555555....************************987777..888 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_019157841.1 215 IIR 217
                     877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVMSNKVLAY EESRQKRLEE NKKRMEELNL NKLAQALRTS PKPSPMKKTK PRAKLPVELT  60
AVRRSSRVAD KPAPNYKEIG LETLRIGRRS YGRRDLLTRV YAADGDRLDA IQRAEELEAG  120
LDNQFPSFIK PMLQSHVTGG FWLGLPVQFC KANLPKHDEM ITLVDENGDE SDTKYLAMKT  180
GLSGGWRGFA LDHELVDGDA LVFQLIEPTR FKVYIIRVNE AEENGAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-83B3 family protein