PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157926.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 291aa    MW: 31163.1 Da    PI: 10.4255
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53e-1395139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k Rt+ q+ s+ qky
   XP_019157926.1  95 AWTEEEHRLFLLGLQKVGKGDWRGISRNFVKSRTPTQVASHAQKY 139
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSLTDRYSPT CTELGDGGGG ATATDGVAGK GFMLFGVRVM EGAAAGSFRK CASMTNLAQF  60
DHHPQESNAD VNAGYTSDDV VHPSAGSRER KRGVAWTEEE HRLFLLGLQK VGKGDWRGIS  120
RNFVKSRTPT QVASHAQKYF LRRNNHGRRR RRSSLFDITT DNVLGAAKLE QQSSTVEKLP  180
VAAFPMTAKP VLPPPVIAGD SSHNYPTKPT RPIPVLPAPP SSKLADLNLN RITSIAEPLP  240
LSLKLPTPPS PQPPSSSSSE QKSPPGRHTP AFQAMSGSFN SNNGDSIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.23e-58MYB_related family protein