PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158199.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 156aa    MW: 18339.1 Da    PI: 7.2895
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.81.6e-3441215128
             NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkge 98 
                     ++F Ptdee++++yL+kk++++++++  +i e+d+ +++P+d   k ++e++ew+fF++r+ +    +r n  +t sg+W +tgkd+++++ +++
  XP_019158199.1   4 LKFLPTDEEIITQYLCKKMDDSSFSA-AAICEADLRRLDPRDGVFK-QGEKREWFFFCSRAIE----QRINIaTTYSGFWITTGKDTQIFK-GET 91 
                     79**********************99.78*************8633.45677*******9875....577874677***************.999 PP

             NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                     lvg+k+++v+y+grap+ +kt+W+mhey+l
  XP_019158199.1  92 LVGMKRSMVYYRGRAPTITKTNWLMHEYSL 121
                     ****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MDSLKFLPTD EEIITQYLCK KMDDSSFSAA AICEADLRRL DPRDGVFKQG EKREWFFFCS  60
RAIEQRINIA TTYSGFWITT GKDTQIFKGE TLVGMKRSMV YYRGRAPTIT KTNWLMHEYS  120
LERSYLSSLQ NEWVICKVFL ENKMEEISNH MAELKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.22e-39NAC family protein