PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158200.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 256aa    MW: 29932.4 Da    PI: 8.3075
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.51.9e-3441225128
             NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                     ++FhP++eel++++L +k++++++++  +i+e+d  k++Pwd+p  ++++ e+kew+fFs+rd  +       r+t sgyWk+tgkd+e+++ ++
  XP_019158200.1   4 LKFHPSEEELITHHLWRKMDNRSFSI-PAIDEAD-RKLDPWDFPgVSFQQgERKEWFFFSPRDWMN----GIYRVTYSGYWKTTGKDTEIFK-GK 91 
                     79*********************999.7799999.69*******7565552556********9986....4799******************.99 PP

             NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                     +l g+k+t+vfy+g+ pk +kt+W+mheyr 
  XP_019158200.1  92 ALLGMKRTMVFYQGKIPKITKTNWLMHEYRS 122
                     *****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDSLKFHPSE EELITHHLWR KMDNRSFSIP AIDEADRKLD PWDFPGVSFQ QGERKEWFFF  60
SPRDWMNGIY RVTYSGYWKT TGKDTEIFKG KALLGMKRTM VFYQGKIPKI TKTNWLMHEY  120
RSESNHEWVI CKVFLMENKM EEISGICSSE ESKPSSMMQT NSISTQAPQP QDTTGLLVKL  180
KYKEDTVKFV LNNPTMDGLK TQVLKRFNKL DTHALKFKYR DLGGEMITII CDEDLQLCLQ  240
SFKSFGRIEV TMSLAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.14e-42NAC family protein