PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158202.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 247aa    MW: 29179.5 Da    PI: 8.4627
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.92.9e-3441215128
             NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                     ++FhP+deel+ ++L +k+ ++++++ ++i e+d  k++Pwd+p  ++++e++ew+fFs++d  +       rat sgyWk+t kd e+++ +++
  XP_019158202.1   4 LKFHPSDEELIIHHLWRKIGNSSFST-SAIGEAD-RKLDPWDFPaFSLQGERREWFFFSHKDWMN----GIYRATYSGYWKTTEKDAEIFK-GKA 91 
                     79*********************999.88***99.69*******668888999*******99976....4799******************.99* PP

             NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                     l g+k+t+vfy+gr pk +kt+W+mheyr 
  XP_019158202.1  92 LLGMKRTMVFYQGRIPKITKTNWFMHEYRS 121
                     ****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDSLKFHPSD EELIIHHLWR KIGNSSFSTS AIGEADRKLD PWDFPAFSLQ GERREWFFFS  60
HKDWMNGIYR ATYSGYWKTT EKDAEIFKGK ALLGMKRTMV FYQGRIPKIT KTNWFMHEYR  120
SESNHEWVIC KVFLIENKME EISGICSSEE SKPSSMMQTN SKDTTGLLVK LKYKEDTVKF  180
VLNNPTMDGL KTQVLKRFNK LDTHALKFKY RDLEREMITI ICDEDLQLCF QSFKSFARIE  240
VTNSQCH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.12e-44NAC family protein