PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158338.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 132aa    MW: 15065.1 Da    PI: 8.8642
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.1e-054685245
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLe 45
                    +  + erE++ Rd +N  f+eL ++l ++    ++   Ka iL+
  XP_019158338.1 46 KIHKAEREKQKRDSMNVLFAELAKVLDPS----HQNYGKACILK 85
                    667889*****************999775....45555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MDSEASTAIN DCAVHVVSSS SKRKHDKAPR KIHEAEREPS NKFPRKIHKA EREKQKRDSM  60
NVLFAELAKV LDPSHQNYGK ACILKETMPL VRELIVQVDN LRKENAALNS ESHYMSVEKD  120
EIRRKDCAGN PD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.22e-19bHLH family protein