PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158595.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 129aa    MW: 14380 Da    PI: 4.9865
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB155.77.9e-49498397
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                    +qd++lPianv+rimkk+lP  akisk+ ke +qec+sefisfvt+easdkc++e+rkt+ngdd++wal+++Gf+ y+e+++ yl+k+re e+++
  XP_019158595.1  4 QQDKLLPIANVGRIMKKILPPTAKISKEGKERMQECASEFISFVTGEASDKCHKENRKTVNGDDICWALSSIGFDVYAEAMTRYLHKFREYERQR 98
                    79******************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MDDQQDKLLP IANVGRIMKK ILPPTAKISK EGKERMQECA SEFISFVTGE ASDKCHKENR  60
KTVNGDDICW ALSSIGFDVY AEAMTRYLHK FREYERQRAN NQTMGGGAAS NDEDGSPPDN  120
QTAGETAYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.18e-54NF-YB family protein