PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158596.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 126aa    MW: 14129.8 Da    PI: 5.2748
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB159.94e-50498397
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                    +qd++lPianv+rimkk+lP  akisk+ake +qec+sefisfvt+easdkc++e+rkt+ngdd++wal++lGf+ y+e+++ yl+k+re e+++
  XP_019158596.1  4 QQDKLLPIANVGRIMKKILPPTAKISKEAKERMQECASEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDVYAEAMTRYLHKFREYERQR 98
                    79******************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MDDQQDKLLP IANVGRIMKK ILPPTAKISK EAKERMQECA SEFISFVTGE ASDKCHKENR  60
KTVNGDDICW ALSSLGFDVY AEAMTRYLHK FREYERQRAN QTMGGAASSN DEDGSDKQTA  120
GETAYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.14e-54NF-YB family protein