PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158801.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 213aa    MW: 23027.9 Da    PI: 9.3561
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-1763113255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr++  +g+++AeIrdp  +   +r +lg++ t+eeAa a+++a+ +l+g
  XP_019158801.1  63 RYRGVRRRQ-WGKFAAEIRDPARG--GARRWLGTYVTPEEAALAYDRAAFELRG 113
                     8*****887.**********8443..3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MASLEYDLGI FDSINHLLYH HSDLPEFMFS GTGNGASSSV GDSGDASEEV VGAGNQAPPE  60
WKRYRGVRRR QWGKFAAEIR DPARGGARRW LGTYVTPEEA ALAYDRAAFE LRGTRALLNF  120
PGLAASGIPE PVRVKRQKPK RRALPPSPPS PSSSSLENGG ASKKTKVSVL NSLAAATAKL  180
GSQTMLEMFQ KDNSSVSIID TQVDVEYLCF PAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-29ERF family protein