PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158803.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 197aa    MW: 21762.5 Da    PI: 9.8776
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544e-1770120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp ++g  +r +lg++ taeeAa a+++a+ +l+g
  XP_019158803.1  70 RYRGVRRRH-WGKFAAEIRDPAKGG--ARRWLGTYLTAEEAALAYDRAAFELRG 120
                     8*****998.**********97765..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MSSWEYDDDL AILDSMDHYL LPPEFMFSET GSLSFGGTGD AVASVEDYSG EATKDDSAAV  60
RVPQTTEWKR YRGVRRRHWG KFAAEIRDPA KGGARRWLGT YLTAEEAALA YDRAAFELRG  120
SRALLNFPAL ASSAGIPEPV RVKRQKPKRR LPSSSSSSEH GGTSKKTKID VLNRLAAATA  180
KLGSQTMLKI FHKYTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.18e-21ERF family protein