PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019158949.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

DBB

Protein Properties

Length: 296aa MW: 31950.9 Da PI: 6.3779

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019158949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.4	1.9e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC +C + H H++vpl XP_019158949.1 4 QCNVCEVAEANVLCCADEAALCWSCDAKVHAAnklaskHQRVPL 47 7***999*******************66899999999986 PP
2	zf-B_box	31.6	3.4e-10	53	95	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 ++kC+ ++e +fC +++ llC++C +++Hk H+ XP_019158949.1 53 PMPKCDICQETVGYFFCLEDRALLCRNCDVAIHKAnayvsaHQ 95 689******9*******************8766666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIQCNVCEV AEANVLCCAD EAALCWSCDA KVHAANKLAS KHQRVPLSGS SSPMPKCDIC 60 QETVGYFFCL EDRALLCRNC DVAIHKANAY VSAHQRFLLT GVKAGLESIE AGPLPSSGNS 120 QSGKKVLETQ SRSVSRTNAP GPSNHQYNEV PPVQISGIGD LAPTKAQLGG SATVNVPQWQ 180 VEEFLALSDL DQNYCYMDNN SSKAGSGKVG GSDCSSVLKV IEKEPDGDEC LGQVPEAPWA 240 VPQIPSPSTV SGFYWPKTYR NPFDAAVFVP DVCYTPLQNP HHQQPNSTSS KRKREY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-91	DBB family protein