PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158965.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 237aa    MW: 25727.9 Da    PI: 10.2929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.9e-1977127255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   g k +r++lg++ t+e+Aa a+++ + kl+g
  XP_019158965.1  77 RYRGVRRRP-WGKFAAEIRDP---GrKGARIWLGTYETPEDAALAYDRTAFKLRG 127
                     8********.**********9...8677*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEPKEEQTES PELELTFSDD DLPTLDILLN HSELSDLLML SDANIAGASN HSSPSPPPNA  60
APKKTAAADS SSADWKRYRG VRRRPWGKFA AEIRDPGRKG ARIWLGTYET PEDAALAYDR  120
TAFKLRGSRA LLNFPLLIGS NMPEPHRVKP RRRARSTEPP RSSSTSSSPP SSSSLLSSPP  180
SSSSSLPPSS PSASLSENGG ARDSPRKRKI DLINAVANTN SLLGSQTMLK MFKLCKF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150156PRRRARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-36ERF family protein