PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158972.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 237aa    MW: 25142.7 Da    PI: 6.8868
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-1879129256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++++g+
  XP_019158972.1  79 SYSGVRKRI-WGKWVSEIREPKK---KSRIWLGTYPTPEMAARAHDVAALAIKGH 129
                     79****887.**********854...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEEEHAITTP PCSSATSTVP ATSSSASCTS NSANSDGSNS SAAATFPKKS LKRVNNGGKN  60
GDENKKSRKN GGANLEYPSY SGVRKRIWGK WVSEIREPKK KSRIWLGTYP TPEMAARAHD  120
VAALAIKGHS ASLNFPHLAH HLPRPASTSP KDIQAAAARA AATTFPSTDA GEDGAQPRAA  180
DNTQQHLLTT NVVDDDIVFD LPDLSLVSGM DDEYGQISPS PLAGNNAGFQ LDEPFLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.15e-43ERF family protein