PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019158985.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 252aa MW: 28586.4 Da PI: 7.8709

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019158985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	126.3	2.4e-39	4	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lp GfrF Pt+eelv++yL++k++g++ +++ vi+ v+iy + Pw+Lp+ ++e ++w++F+ ++ a+g ++nr t++gyWkatg+ XP_019158985.1 4 LPTGFRFYPTEEELVSFYLRNKLRGERPDINLVIPVVNIYLHRPWELPQlagvvGGHGECEQWFYFVAGPENMARGGKPNRLTTEGYWKATGSPG 98 699*************************889***********65664322235559***************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s +++++g k+t+vfy+grap+g+kt+W ++ey++ XP_019158985.1 99 LVFSLnNNRVIGEKRTMVFYTGRAPNGTKTEWKINEYKA 137 99767888***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MEDLPTGFRF YPTEEELVSF YLRNKLRGER PDINLVIPVV NIYLHRPWEL PQLAGVVGGH 60 GECEQWFYFV AGPENMARGG KPNRLTTEGY WKATGSPGLV FSLNNNRVIG EKRTMVFYTG 120 RAPNGTKTEW KINEYKAVRG DATSASTPLS NLELCQEFSL CRLYKKSKCD RAFDRRPLDL 180 TAIRRRRIAQ PPPPQDNVHT TAIIVEDPES TGAGRISPTG AAVIPSNNAT VTRLHWDNFE 240 PIWDWEDCFS LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-62	NAC family protein