PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158986.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 201aa    MW: 22831.7 Da    PI: 10.0905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1669119255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg++  ae+Aa a+++a+ k++g
  XP_019158986.1  69 RYRGVRRRR-WGKFAAEIRDPKRRG--LRIWLGTYEKAEDAAVAYDRAAYKMRG 119
                     7*****777.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MYQENLSNSD LFLLESISQH LLNDSDFSDV LFRMNPHSDE FEIIEENSQS VVEGSGHAAA  60
DDGRGDWRRY RGVRRRRWGK FAAEIRDPKR RGLRIWLGTY EKAEDAAVAY DRAAYKMRGS  120
RAVLNFPHLI GSPDAPDPVR VKPRKRQQTS PEPLPSSPSS SVDGESPKRR KIELINAVAK  180
TNLMNAISGI QFRPTLQLVL R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-19ERF family protein