PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159058.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 81aa    MW: 9078.03 Da    PI: 4.1323
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.68.9e-113474345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E+ l+ + +++ G + W++Ia +++ gRt++++  +w+
   XP_019159058.1 34 VFSEDEEILITRMFNLVGER-WSLIAGRIP-GRTAEEIEKYWN 74
                     79******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MADLDTNSST CGTEAQVDSI AVEVTSKGSE KELVFSEDEE ILITRMFNLV GERWSLIAGR  60
IPGRTAEEIE KYWNSRYSTS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.18e-18MYB_related family protein