PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159059.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 80aa    MW: 9006.95 Da    PI: 4.1323
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.6e-113373345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E+ l+ + +++ G + W++Ia +++ gRt++++  +w+
   XP_019159059.1 33 VFSEDEEILITRMFNLVGER-WSLIAGRIP-GRTAEEIEKYWN 73
                     79******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MADLDTNSST CGTEAQVDSI VEVTSKGSEK ELVFSEDEEI LITRMFNLVG ERWSLIAGRI  60
PGRTAEEIEK YWNSRYSTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.18e-18MYB_related family protein