PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159091.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 386aa    MW: 42816.5 Da    PI: 7.8931
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19180230256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++ + +l+ge
  XP_019159091.1 180 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAAMAYDREAYNLRGE 230
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MSEDGGKSKA AVTEQTGSER DDQQWRQVFE DASMSSRPLK RIKSPEHKSS VQSLLPFPSS  60
MAAYTAAPPP STSSSSSSSR LVFPFALDGA EQSVESLQQL RWNNRNAIPL LHTPPQQNQR  120
ILRQRSAAYP PYFAGEAAAP LQQHHHHQLL RYWNDTLNLS PRGRMTVRPP AMPPVSTTKL  180
YRGVRQRHWG KWVAEIRLPR NRTRLWLGTF DTAEEAAMAY DREAYNLRGE NARLNFPELF  240
LGKDKNPSAA PSSSENTPGS PKSPPPEAEP PPPPPPAEKE DEAKKNSETA AAAAAAAGAA  300
AQQSSEFMWG EMNEEWLNAI SAGWGPGSPV WDDLYITNNH FMPFNLPFTN LHHHSDDPKK  360
QDNSTAPSSS SSSSCPAKPF FWKDQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.14e-48ERF family protein