PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159269.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Trihelix
Protein Properties Length: 344aa    MW: 39105.5 Da    PI: 9.1441
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix57.92.7e-1842134186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr....tsessstcpyfdqle 86 
                     +W+++e+ aLi+a+r+++ +lrrg+l++++W+ev++ +         +++ qC++k+e+l+kry+++ +++ +     t +  st+ +f++++
  XP_019159269.1  42 CWSHDETVALIDAYRDKWYSLRRGNLRANHWQEVAEDIavrCPVDPPKTSMQCRHKMEKLRKRYRAEIQRAASYgggsTRRYCSTWIHFKRMD 134
                     8************************************96433344589*****************9988877642123566667899999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MAASPTQSNQ EQCTTPPEIP FASVTVASHG AGASSRRLPP PCWSHDETVA LIDAYRDKWY  60
SLRRGNLRAN HWQEVAEDIA VRCPVDPPKT SMQCRHKMEK LRKRYRAEIQ RAASYGGGST  120
RRYCSTWIHF KRMDAMERGP DAASPPQDEE EFEDEPEDFK QNSVKHIGDI YSQHNLNSNK  180
RNNFQEPMSN GGAGFRIRIP SARPIPTPPM AKPYSKIDEM LIQFPNPNPN PNHGSSRSYR  240
RDGVMKKEKA SSLGKRIVEE VVEKRNGDPI AEAVAAIKML GEGLVRVENM KMDVARELEQ  300
MKMEMEMKKT EMILESQQKI VEAFAMSFSE KNPKKARRMP TPEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.19e-59Trihelix family protein