PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019159296.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 256aa MW: 28944.8 Da PI: 5.7319

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019159296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	126.8	1.8e-39	4	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +p+GfrF Pt+eelv++yL +k++g++ +++ vi+ v+iy + PwdLp+ + ++++++w++F++ ++ a+g ++nr t++gyWkatg+ XP_019159296.1 4 MPVGFRFYPTEEELVSFYLGNKLRGERPDIDLVIPVVNIYLHRPWDLPQlagvASYGDDEQWFYFMPGPENMARGGKPNRLTTEGYWKATGTPLL 98 699*************************888***********656655556889******************************9 PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s +++++g k+t+vfy+grap+g+kt+W ++ey++ XP_019159296.1 99 VFSLnNHRVIGEKRTMVFYTGRAPNGTKTEWKINEYKA 136 998757888*************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEDMPVGFRF YPTEEELVSF YLGNKLRGER PDIDLVIPVV NIYLHRPWDL PQLAGVASYG 60 DDEQWFYFMP GPENMARGGK PNRLTTEGYW KATGTPLLVF SLNNHRVIGE KRTMVFYTGR 120 APNGTKTEWK INEYKAVHGE ASASAPLSDL ELRQEFSLCR LYKKPKCDRA FDRRPLGGVT 180 AVRRRIAHQP PQDSVQTAAM TLPQMDNNPP ANEMIGAGNS SPAGDAVIPS NNAMGTQVFW 240 DNFTPIWDWE DCFNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-63	NAC family protein