PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159336.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Nin-like
Protein Properties Length: 282aa    MW: 30751.3 Da    PI: 9.2252
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK621e-192268349
          RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                    k++s++++sk Fslp+ dAA +Lgvc++vLK+iC ++G+ RWP+Rk 
  XP_019159336.1 22 KSLSFDEVSKLFSLPLSDAADTLGVCTSVLKKICYENGLVRWPYRKF 68
                    789*******************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSTVQISNSG SNPNPNIKTD PKSLSFDEVS KLFSLPLSDA ADTLGVCTSV LKKICYENGL  60
VRWPYRKFLS GKSIEEIKKD AAKEKQEQHA ELPKPAGEKP NLSANSTPST SKGSPLQNKG  120
SSAAQEMPKS AAASQQQGSK TAQTLSSQHL LSVNLPKATT AGSDEFKYGF PSDGLSAISY  180
KWWGSRSTDG NEDTKKEGNA EESKQQSAVP MEESAVKTGK SNVDSFRADS LSDLREQAAK  240
EGKEALRLGV YREHSLFKLD LTKRKVLLQV FKSSYPPQWE QE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.14e-09Nin-like family protein