PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159411.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family S1Fa-like
Protein Properties Length: 84aa    MW: 9395.1 Da    PI: 10.04
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA128.32.3e-401984570
            S1FA  5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                     ve+kG+nPGlivll+vgglll f+vgn++ly yaqk+lPP+kkkP+skkk+k+e+l+qGv++PGe
  XP_019159411.1 19 DVEVKGFNPGLIVLLLVGGLLLAFFVGNFLLYRYAQKALPPKKKKPISKKKMKKERLRQGVSAPGE 84
                    68***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MDYEGEFEHD APPSFDGMDV EVKGFNPGLI VLLLVGGLLL AFFVGNFLLY RYAQKALPPK  60
KKKPISKKKM KKERLRQGVS APGE