PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159476.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 211aa    MW: 23373 Da    PI: 9.1827
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-192373155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrdp++   ++r++lg+f taeeAa a++ a+++++g
  XP_019159476.1 23 PRYRGVRKRP-WGRFAAEIRDPVK---KARVWLGTFNTAEEAAHAYDTAARAFHG 73
                    68********.**********654...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MRHRKTPATP IQQPVANIAA DPPRYRGVRK RPWGRFAAEI RDPVKKARVW LGTFNTAEEA  60
AHAYDTAARA FHGPKAKTNF GFTDRRDNDN NNNHSHSIIP PVALPGETHF QRFPYSRPAS  120
SSLSSTVESS SGPRPPSDRN KQPPPRPKVP VPPLPDDCHS DCDSSSSVVD DQDQTTSSFF  180
PKQPLSFDLN LPPPPLDDFV ADELKVTALH L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.11e-20ERF family protein