PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159651.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 197aa    MW: 22261 Da    PI: 9.6312
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.8e-20655255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAa+a+++a+  + g
  XP_019159651.1  6 KFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDEAAILMSG 55
                    89******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVHSRKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDEAA ILMSGRNAKT  60
NFPITPQDSQ ANQPNNNIHR PADSSIRSSP NPLSEILHAK LRKCSKVPSP SLTCLRLDIE  120
SSHIGVWQKR AGQPSDSKWV MTVELQKNNR GSDGGEGTKK AESVSARGMD EEERLALQMI  180
DELLHINTPT PSFEDHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.16e-63ERF family protein