PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159657.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 185aa    MW: 20056.6 Da    PI: 10.329
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000334668123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+k F++   L  H  +H
  XP_019159657.1 46 FQCKTCDKKFPSFQALGGHRASH 68
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MLMKRSREYA GVEAEAMANC LMLLAHVGRN SSSSSPSLVS KDLCSFQCKT CDKKFPSFQA  60
LGGHRASHKK PKLVAPAAGE QASSPEKPKM HRCSICGLEF AMGQALGGHM RRYRAAMMKE  120
GFEKPPAIAM AMAVPVLKRT TSSKRIFGFG LNLDLNLTPA ENVNLKIEST TPTPTPATPV  180
LRCFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.11e-32C2H2 family protein