PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160437.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 121aa    MW: 13426.4 Da    PI: 10.5353
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.61.6e-102757333
                    -SS-EEEEEEE--TT-SS-EEEEEE-STT-- CS
            WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsagCp 33
                    D ++WrKYGqK +k+s++ r+  +   ++C+
  XP_019160437.1 27 DSWSWRKYGQKAIKESPHRRAMLKVMESTCC 57
                    99*******************9999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MAQKVVVTVK LGEGDGRKRK SEGPPLDSWS WRKYGQKAIK ESPHRRAMLK VMESTCCLEP  60
TAHDGTWVIT DATLVRVVQL RNRLGKRDSN RNGGDGDREA ALPIPEPATT TTRIVNMQTT  120
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.12e-10WRKY family protein