PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160501.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 189aa    MW: 21525.7 Da    PI: 9.3673
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.26e-32110168159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s++prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+
  XP_019160501.1 110 LDDGYKWRKYGQKSVKNSTHPRSYYRCTHHTCNVKKQIQRLSKDKSIVVTTYEGIHNHP 168
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEGEDPPPPS LPPALLPNDI NIQDLFSFPS TSLVEHNPSI MLSHLPIQSS VVGSDSIDWV  60
GLLSGCMDQM PAPAPARREG ENYVQKNKGK RKKYVPPRVA FHTRSTEDIL DDGYKWRKYG  120
QKSVKNSTHP RSYYRCTHHT CNVKKQIQRL SKDKSIVVTT YEGIHNHPCE KLMETLTPLL  180
KQLQFLSRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.13e-59WRKY family protein