PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160621.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 199aa    MW: 23169.5 Da    PI: 10.2837
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160621.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.35.2e-2271302128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevl 93 
                     p G+rF+Ptd el+  +L+  v+g+       +ke ++y+  ePw+L    +++e+  y+F++ +kk+++++r +r++   +g+Wka+ k k+++
  XP_019160621.1   7 PTGYRFRPTDMELL-GFLALFVTGSLSLSWYPMKEKNLYSGeEPWQLF--GNSKERIRYYFTPLKKKNPRNSRYRRTIGdgKGTWKAQDKGKPIF 98 
                     89************.89999999887544466******98759****6..34566777******************87656899*********** PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +g+ +g k++L + ++   + +  +W+m+ey l
  XP_019160621.1  99 K-SGRIMGYKRSLRYENK--GSEHDGQWLMKEYYL 130
                     *.999*********9843..333579*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MAHPKIPTGY RFRPTDMELL GFLALFVTGS LSLSWYPMKE KNLYSGEEPW QLFGNSKERI  60
RYYFTPLKKK NPRNSRYRRT IGDGKGTWKA QDKGKPIFKS GRIMGYKRSL RYENKGSEHD  120
GQWLMKEYYL PDTVRKNLKV PLKDIVLCRI KRKQNWDSKN HESESTTTND IRDIIGDLST  180
PATPEPSESE TTTLTLLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-17NAC family protein