PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160622.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 115aa    MW: 13357.3 Da    PI: 10.7083
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.62.2e-14793288
             NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgk 88
                    p G+rF+Ptd el+  +L+  v+g+       +ke ++y+  ePw+L    +++e+  y+F++ +kk+++++r +r++   +g+Wka+ k
  XP_019160622.1  7 PTGYRFRPTDMELL-GFLALFVTGSLSLSWYPMKEKNLYSGeEPWQLF--GNSKERIRYYFTPLKKKNPRNSRYRRTIGdgKGTWKAQDK 93
                    89************.89999999887544466******98759****6..34566777******************87655899**9977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MAHPKIPTGY RFRPTDMELL GFLALFVTGS LSLSWYPMKE KNLYSGEEPW QLFGNSKERI  60
RYYFTPLKKK NPRNSRYRRT IGDGKGTWKA QDKGTIKGYS SLSNQKETKL GQQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.12e-09NAC family protein