PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161008.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 210aa    MW: 24258.5 Da    PI: 5.4229
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.42.6e-092764139
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39
                    +fY +YA ++GF+vr+s+ +k+ + g+i ++++vCs+e 
  XP_019161008.1 27 DFYIKYAANAGFDVRRSSDEKN-KYGTILRKRLVCSREE 64
                    6*****************9999.6677*********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MVWIPECDPC LKPFEGQVFE SLDTGIDFYI KYAANAGFDV RRSSDEKNKY GTILRKRLVC  60
SREELVGGVA NVGATKQDFK NYKREMLEFM REGDAQMVIS KYLAKKADDK NMFFDYEMNE  120
QDNLALLFWA DGVARQNYGA FGDVVSFDAT YQTNRYKLVF VPFTGVDNHK RFVTFGAGLI  180
DREDVESYRW ILQKFKDAMA NGKYTPVDHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-27FAR1 family protein