PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161201.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 286aa    MW: 32399.8 Da    PI: 6.7808
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.31.6e-15120206191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     ++YneYA ++GFsvrk k+++s   ++++++tf  sk g++++  k        ++  rt C a ++   + +g w  +k e+ HnH+l+p
  XP_019161201.1 120 DMYNEYAFRLGFSVRKGKQRYSGAMKTVKTKTFHFSKAGFKRNLGKG----CYAKVDGRTCCPALVQFDVDGNGMWTASKHEKLHNHDLVP 206
                     58****************************************98877....889999*******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MWISSENFRH IKSYARSIMM MVLLDYIKVN GAELQGDKNL EECIIWYEEG ILLGNNITEA  60
FNYYVIGQCF PDIDDVIEQQ EIAVTDEGND LVHLAVIEDD APVDQNLVGM SVCSIDETYD  120
MYNEYAFRLG FSVRKGKQRY SGAMKTVKTK TFHFSKAGFK RNLGKGCYAK VDGRTCCPAL  180
VQFDVDGNGM WTASKHEKLH NHDLVPPSKS YHLQSHRMVS RNHLSYLKDL KKSGVFVADG  240
IRFIKTQSSG SPRVGFTSRD AYNPLCTDAL KKLDGTDSNT LIEIFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-12FAR1 family protein