PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161297.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 226aa    MW: 25724.9 Da    PI: 10.1434
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.98.8e-12105146351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_019161297.1 105 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 146
                     79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVSLRRRRLL GLCSGRSSFI VPFPKFPENG SMPGNYMQNT KPVGSVFSKP SMDVDQLKEE  60
TTALGTSSFS ASPPSKEQEN AKFPEVKRRK WHRRKHFDNQ EPCLMRGVYF KNMKWQAAIK  120
VDKKQIHLGT VGSQEEAARL YDRAAFMCGR EPNFELSEEE KQELRKFNWD EFLAMTRSAI  180
TSKKTRRRSG VGARRKSESS PQNSEEGEQQ GNGFSASDDA DQDTSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-49ERF family protein