PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161399.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 193aa    MW: 22295.4 Da    PI: 5.1579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.95.5e-25131361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     lp+Gf F+Ptd+el+ +yLkkk++g++l+  ++ike+  +y++ P+ Lp  +++  +e+e y+F+++ kk++ g+    +  +g Wk+ g +++v
  XP_019161399.1  13 LPVGFVFSPTDSELI-DYLKKKINGRPLPS-DIIKEIpYLYEYPPELLPiGEFEDgRENEAYYFTHKGKKSPPGELLGGKKFDGQWKSNGPEERV 105
                     799************.9************9.99****889*********655555266699***********99998888889************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +++  g kk L +y+ ++     + Wv+ eyr 
  XP_019161399.1 106 FA-DNQILGFKKELYLYRREK----MSGWVIREYRC 136
                     **.999***********4333....578******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEFGVGMGSR QHLPVGFVFS PTDSELIDYL KKKINGRPLP SDIIKEIPYL YEYPPELLPI  60
GEFEDGRENE AYYFTHKGKK SPPGELLGGK KFDGQWKSNG PEERVFADNQ ILGFKKELYL  120
YRREKMSGWV IREYRCNPEL VRARDILDLI QNYVVLHIMF DPDLRGTFSA EDSFSIPMEV  180
AKGLSFFNNN AEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.14e-15NAC family protein