PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161473.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 289aa    MW: 32411.1 Da    PI: 4.5814
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.45.5e-32104160258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     dDgy+WrKYGqK++k+s++prsYY+Ct ++C +kk+ver+++dp++++itYeg H h
  XP_019161473.1 104 DDGYKWRKYGQKSIKNSPNPRSYYKCTNPKCGAKKQVERCSDDPDTLIITYEGLHLH 160
                     8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MAAHTEFMYP ESMIMDAEEL IQELLDDESP LFLAPQETIM ESSSFAGVSN YSSFLNSLIY  60
GHANQPLHDA SSCMLDKGLM VSRDHHESKY TLRIKTNCGN AMADDGYKWR KYGQKSIKNS  120
PNPRSYYKCT NPKCGAKKQV ERCSDDPDTL IITYEGLHLH FAYPFFTLDN EPNNTIDVVP  180
TKKQKKTTAE VVESQEQEQE KTNQVVYENP GITNPTPIAQ LLDDEWDYSS QGLLQDVVPL  240
VIRRPSSTIC NATTTSYSSS SSFLSPPTSP SLSCSTNNCF LPDFDASNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.11e-38WRKY family protein