PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162067.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 344aa MW: 36880.1 Da PI: 9.3503

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.3e-39	35	94	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+ lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rkn+k+ XP_019162067.1 35 QEQPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNNKR 94 57899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MMMNSYQTDG KNLMASSSSS STAAAARVME KPISQEQPLK CPRCDSSNTK FCYYNNYSLS 60 QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NNKRIRRSSA ASAASSSSSP AAIDVVSSSS 120 TSPAVSSAPL QIPAPTPPPQ TKTQINPLFY GLPINPSSEL NPPFQRLFGS RVSSSDQSYD 180 NNHDSMISSP GFLGGHGENG FDPLLSSYPV FRSSSSILTT PITTSTTTLA SLIASSLEQR 240 KFNASGDITN RNFLGMPSYN GESVMAGNII LGNGEFLKGD ERQNRLNWNG GGVPMNNHNI 300 LQTEGVVNIN YSSTPSDPSF PWNGGWMDPS SMGSSLPAFS HLAS

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MMMNSYQTDG KNLMASSSSS STAAAARVME KPISQEQPLK CPRCDSSNTK FCYYNNYSLS  60
QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NNKRIRRSSA ASAASSSSSP AAIDVVSSSS  120
TSPAVSSAPL QIPAPTPPPQ TKTQINPLFY GLPINPSSEL NPPFQRLFGS RVSSSDQSYD  180
NNHDSMISSP GFLGGHGENG FDPLLSSYPV FRSSSSILTT PITTSTTTLA SLIASSLEQR  240
KFNASGDITN RNFLGMPSYN GESVMAGNII LGNGEFLKGD ERQNRLNWNG GGVPMNNHNI  300
LQTEGVVNIN YSSTPSDPSF PWNGGWMDPS SMGSSLPAFS HLAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	4e-33	Dof family protein