PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162122.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 316aa    MW: 35831.8 Da    PI: 6.3626
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind95.74.8e-30451362102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+ye+++d+ ++++isws++gnsf+v+++  +a+++Lp++F+hsnf+SF+ QLn YgF+k+  ++         we+++ +F++gkk+ll +
  XP_019162122.1  45 FLIKTYEMVDDPLTNHIISWSHSGNSFIVWNHLILASDILPRFFRHSNFSSFIYQLNNYGFRKIGLQR---------WEYENAWFQAGKKHLLMN 130
                     9***************************************************************9999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     ik +++
  XP_019162122.1 131 IKSRHH 136
                     **9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MADTGGGSAL WEGGIGGGGG GEGDGVWPSS KTKIRGLHGS SPPPFLIKTY EMVDDPLTNH  60
IISWSHSGNS FIVWNHLILA SDILPRFFRH SNFSSFIYQL NNYGFRKIGL QRWEYENAWF  120
QAGKKHLLMN IKSRHHKLRK MSQRGSQECV YEMKEELDSL RDDQNMITAE MHKLKQMQED  180
MQSQMCAFKK HVRMVETKSR EELTVLAKAM NKVMMKEVLK YVREGKEQKL GLQGTGEMSK  240
SGEGKDESIE VDTSESSKSF GAETGKNKAE EEQQKKEVKL DDLMISKMIM DEAEDVIAKT  300
TSLEEEEVVV VVNLEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.13e-54HSF family protein