PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162135.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 154aa    MW: 16972.1 Da    PI: 10.2391
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-1961112256
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd       + +r++lg+f taeeAa a+++a+ +++g+
  XP_019162135.1  61 HYRGVRRRP-WGKFAAEIRD----SarQGARVWLGTFNTAEEAALAYDRAAFQMRGA 112
                     8********.**********....33334*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MVPGTQNELP LNENDSQEVV LYQILNEAAA TLNSSPFLQP RSRGIPQQSI LRPTQSIAKK  60
HYRGVRRRPW GKFAAEIRDS ARQGARVWLG TFNTAEEAAL AYDRAAFQMR GARTLLNFPA  120
HLVEAPPSSV LRLHYPSNSC SNEASSGGTV NPNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-30ERF family protein