PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162229.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 159aa    MW: 17387.3 Da    PI: 4.9816
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.6e-211767255
             AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+++AeIrd  + ng   r++lg++gtaeeAa+a+++a+ +++g
  XP_019162229.1 17 KYRGVRRRP-WGKYAAEIRDS-NrNG--VRVWLGTHGTAEEAARAYDRAAYEMRG 67
                    8********.**********4.4254..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MDEDRGDGKK EEEAEVKYRG VRRRPWGKYA AEIRDSNRNG VRVWLGTHGT AEEAARAYDR  60
AAYEMRGKFA VLNFPEEYPP QVATAAASPS APPHVASGFP STAPESASSG GCAVVENVGN  120
KCSVEGRETT AKEVIEFECL DDKLLEDLLG CHETEPKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.11e-21ERF family protein