PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162239.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 130aa    MW: 14398 Da    PI: 5.0359
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77e-191464255
             AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +g++ AeIrd  + ng  +r++lg+f taeeAa+a+++a+ +++g
  XP_019162239.1 14 KFRGVRKRP-WGKYGAEIRDS-NrNG--ARVWLGTFATAEEAARAYDRAAYAMRG 64
                    89*******.**********4.4254..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MEEDHRGGKT EEVKFRGVRK RPWGKYGAEI RDSNRNGARV WLGTFATAEE AARAYDRAAY  60
AMRGKFAVLN FPGEYPPSSS LQLRAAETSP SPSTSSAAVV ENADKQTTKE VIEIECLDDK  120
LLEDLLADCQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-23ERF family protein